Matthew Auton: search on Z-Library

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1

Genes mirror geography within Europe

Novembre, John, Johnson, Toby, Bryc, Katarzyna, Kutalik, Zoltán, Boyko, Adam R., Auton, Adam, Indap, Amit, King, Karen S., Bergmann, Sven, Nelson, Matthew R.

Journal:

Year:

2008

Language:

english

File:

PDF, 2.10 MB

english, 2008

2

Extended Summary: Design of active analogues of a peptide using D-optimal Design, QSAR models and a combinatorial search algorithm

Mee, Roger P., Auton, Timothy R., Eldridge, Matthew D., Brooks, Alan G.

Journal:

Pesticide Science

Year:

1997

Language:

english

File:

PDF, 185 KB

english, 1997

3

Empirical scoring functions: I. The development of a fast empirical scoring function to estimate the binding affinity of ligands in receptor complexes

Matthew D. Eldridge, Christopher W. Murray, Timothy R. Auton, Gaia V. Paolini, Roger P. Mee

Journal:

Journal of Computer-Aided Molecular Design

Year:

1997

Language:

english

File:

PDF, 193 KB

english, 1997

4

Empirical scoring functions. II. The testing of an empirical scoring function for the prediction of ligand-receptor binding affinities and the use of Bayesian regression to improve the quality of the model

Christopher W. Murray, Timothy R. Auton, Matthew D. Eldridge

Journal:

Journal of Computer-Aided Molecular Design

Year:

1998

Language:

english

File:

PDF, 144 KB

english, 1998

5

Edge sharpness as a function of depth in plain film radiography

Auton, Timothy, Bishop, Romilly, Haliczenko, Kylie, Hurley, Matthew, Madden, Shane, Rose, Bethany, Hart, Robin

Journal:

Year:

2005

Language:

english

File:

PDF, 154 KB

english, 2005

6

Structural thermodynamics of protein preferential solvation: Osmolyte solvation of proteins, aminoacids, and peptides

Matthew Auton, D. Wayne Bolen, Jörg Rösgen

Journal:

Proteins: Structure, Function, and Bioinformatics

Year:

2008

Language:

english

File:

PDF, 284 KB

english, 2008

7

Genes mirror geography within Europe

Novembre, John, Johnson, Toby, Bryc, Katarzyna, Kutalik, Zoltán, Boyko, Adam R., Auton, Adam, Indap, Amit, King, Karen S., Bergmann, Sven, Nelson, Matthew R.

Journal:

Year:

2008

Language:

english

File:

PDF, 72 KB

english, 2008

8

Osmolyte effects on protein stability and solubility: A balancing act between backbone and side-chains

Matthew Auton, Jörg Rösgen, Mikhail Sinev, Luis Marcelo F. Holthauzen, D. Wayne Bolen

Journal:

Biophysical Chemistry

Year:

2011

Language:

english

File:

PDF, 1.34 MB

english, 2011

9

Metrics that Differentiate the Origins of Osmolyte Effects on Protein Stability: A Test of the Surface Tension Proposal

Matthew Auton, Allan Chris M. Ferreon, D. Wayne Bolen

Journal:

Journal of Molecular Biology

Year:

2006

Language:

english

File:

PDF, 433 KB

english, 2006

10

Conformational Stability and Domain Unfolding of the Von Willebrand Factor A Domains

Matthew Auton, Miguel A. Cruz, Joel Moake

Journal:

Journal of Molecular Biology

Year:

2007

Language:

english

File:

PDF, 592 KB

english, 2007

11

Genome-wide patterns of genetic variation in worldwide Arabidopsis thaliana accessions from the RegMap panel

Horton, Matthew W, Hancock, Angela M, Huang, Yu S, Toomajian, Christopher, Atwell, Susanna, Auton, Adam, Muliyati, N Wayan, Platt, Alexander, Sperone, F Gianluca, Vilhjálmsson, Bjarni J, Nordborg, Mag

Journal:

Nature Genetics

Year:

2012

Language:

english

File:

PDF, 735 KB

english, 2012

12

Changes in Thermodynamic Stability of von Willebrand Factor Differentially Affect the Force-Dependent Binding to Platelet GPIbα

Auton, Matthew, Sedlák, Erik, Marek, Jozef, Wu, Tao, Zhu, Cheng, Cruz, Miguel A.

Journal:

Biophysical Journal

Year:

2009

Language:

english

File:

PDF, 1.21 MB

english, 2009

13

The Mechanism of VWF-Mediated Platelet GPIbα Binding

Auton, Matthew, Zhu, Cheng, Cruz, Miguel A.

Journal:

Biophysical Journal

Year:

2010

Language:

english

File:

PDF, 961 KB

english, 2010

14

Free Cholesterol Determines Reassembled High-Density Lipoprotein Phospholipid Phase Structure and Stability

Auton, Matthew, Bassett, G. Randall, Gillard, Baiba K., Pownall, Henry J.

Journal:

Year:

2013

Language:

english

File:

PDF, 1.80 MB

english, 2013

15

Urea-temperature phase diagrams capture the thermodynamics of denatured state expansion that accompany protein unfolding

Tischer, Alexander, Auton, Matthew

Journal:

Protein Science

Year:

2013

Language:

english

File:

PDF, 2.10 MB

english, 2013

16

Kinetic Control in Protein Folding for Light Chain Amyloidosis and the Differential Effects of Somatic Mutations

Blancas-Mejía, Luis.M., Tischer, Alexander, Thompson, James R., Tai, Jonathan, Wang, Lin, Auton, Matthew, Ramirez-Alvarado, Marina

Journal:

Journal of Molecular Biology

Year:

2014

Language:

english

File:

PDF, 1.57 MB

english, 2014

17

The effects of N -ethyl- N ′-methyl imidazolium chloride on the solubility, stability and aggregation of tc-rPA

Tischer, Alexander, Pultke, Heiko, Topf, Andrea, Auton, Matthew, Lange, Christian, Lilie, Hauke

Journal:

Year:

2014

Language:

english

File:

PDF, 354 KB

english, 2014

18

Additive Transfer Free Energies of the Peptide Backbone Unit That Are Independent of the Model Compound and the Choice of Concentration Scale †

Auton, Matthew, Bolen, D. Wayne

Journal:

Year:

2004

Language:

english

File:

PDF, 207 KB

english, 2004

19

Alanine and proline content modulate global sensitivity to discrete perturbations in disordered proteins

Perez, Romel B., Tischer, Alexander, Auton, Matthew, Whitten, Steven T.

Journal:

Proteins: Structure, Function, and Bioinformatics

Year:

2014

Language:

english

File:

PDF, 569 KB

english, 2014

20

Misfolding of vWF to Pathologically Disordered Conformations Impacts the Severity of von Willebrand Disease

Tischer, Alexander, Madde, Pranathi, Moon-Tasson, Laurie, Auton, Matthew

Journal:

Biophysical Journal

Year:

2014

Language:

english

File:

PDF, 1.56 MB

english, 2014

21

Oxidative refolding of rPA in l -ArgHCl and in ionic liquids: A correlation between hydrophobicity, salt effects, and refolding yield

Tischer, Alexander, Lilie, Hauke, Auton, Matthew, Lange, Christian

Journal:

Year:

2014

Language:

english

File:

PDF, 414 KB

english, 2014

22

A molten globule intermediate of the Von Willebrand factor A1 domain firmly tethers platelets under shear flow

Tischer, Alexander, Madde, Pranathi, Blancas-Mejia, Luis. M., Auton, Matthew

Journal:

Proteins: Structure, Function, and Bioinformatics

Year:

2014

Language:

english

File:

PDF, 475 KB

english, 2014

23

[Methods in Enzymology] Osmosensing and Osmosignaling Volume 428 || Application of the Transfer Model to Understand How Naturally Occurring Osmolytes Affect Protein Stability

Year:

2007

Language:

english

File:

PDF, 328 KB

english, 2007

24

The linker between the D3 and A1 domains of vWF suppresses A1-GPIbα catch bonds by site-specific binding to the A1 domain

Tischer, Alexander, Cruz, Miguel A., Auton, Matthew

Journal:

Protein Science

Year:

2013

Language:

english

File:

PDF, 454 KB

english, 2013

25

Bayesian refinement of association signals for 14 loci in 3 common diseases

Maller, Julian B, McVean, Gilean, Byrnes, Jake, Vukcevic, Damjan, Palin, Kimmo, Su, Zhan, Howson, Joanna M M, Auton, Adam, Myers, Simon, Morris, Andrew, Pirinen, Matti, Brown, Matthew A, Burton, Paul

Journal:

Nature Genetics

Year:

2012

Language:

english

File:

PDF, 449 KB

english, 2012

26

Structural Origins of Misfolding Propensity in the Platelet Adhesive Von Willebrand Factor A1 Domain

Zimmermann, Michael T., Tischer, Alexander, Whitten, Steven T., Auton, Matthew

Journal:

Biophysical Journal

Year:

2015

Language:

english

File:

PDF, 2.19 MB

english, 2015

27

Thermodynamic and fibril formation studies of full length immunoglobulin light chain AL-09 and its germline protein using scan rate dependent thermal unfolding

Blancas-Mejía, Luis M., Horn, Timothy J., Marin-Argany, Marta, Auton, Matthew, Tischer, Alexander, Ramirez-Alvarado, Marina

Journal:

Biophysical Chemistry

Year:

2015

Language:

english

File:

PDF, 2.13 MB

english, 2015

28

Genome-Wide Patterns of Population Structure and Admixture in West Africans and African Americans

Katarzyna Bryc, Adam Auton, Matthew R. Nelson, Jorge R. Oksenberg, Stephen L. Hauser, Scott Williams, Alain Froment, Jean-Marie Bodo, Charles Wambebe, Sarah A. Tishkoff, Carlos D. Bustamante and Mary-

Journal:

Proceedings of the National Academy of Sciences

Year:

2010

Language:

english

File:

PDF, 1.51 MB

english, 2010

29

Mutational Constraints on Local Unfolding Inhibit the Rheological Adaptation of von Willebrand Factor

Tischer, Alexander, Campbell, James C., Machha, Venkata R., Moon-Tasson, Laurie, Benson, Linda M., Sankaran, Banumathi, Kim, Choel, Auton, Matthew

Journal:

Journal of Biological Chemistry

Year:

2016

Language:

english

File:

PDF, 3.82 MB

english, 2016

30

Untangling a Structurally Resolved Protein Folding Intermediate

Journal:

Biophysical Journal

Year:

2016

Language:

english

File:

PDF, 156 KB

english, 2016

31

Data on the purification and crystallization of the loss-of-function von Willebrand disease variant (p.Gly1324Ser) of the von Willebrand factor A1 domain

Cambell, James, Tischer, Alexander, Machha, Venkata, Moon-Tasson, Laurie, Sankaran, Banumathi, Kim, Choel, Auton, Matthew

Journal:

Year:

2016

Language:

english

File:

PDF, 550 KB

english, 2016

32

Chaperonin-Based Biolayer Interferometry To Assess the Kinetic Stability of Metastable, Aggregation-Prone Proteins

Lea, Wendy A., O’Neil, Pierce T., Machen, Alexandra J., Naik, Subhashchandra, Chaudhri, Tapan, McGinn-Straub, Wesley, Tischer, Alexander, Auton, Matthew T., Burns, Joshua R., Baldwin, Michael R., Khar

Journal:

Year:

2016

Language:

english

File:

PDF, 2.86 MB

english, 2016

33

Comment on “Osmolyte Effects on Monoclonal Antibody Stability and Concentration-Dependent Protein Interactions with Water and Common Osmolytes”

Rösgen, Jörg, Auton, Matthew

Journal:

Journal of Physical Chemistry B

Year:

2016

Language:

english

File:

PDF, 104 KB

english, 2016

34

The von Willebrand Factor A1-Collagen III Interaction is Independent of Conformation and Type 2 von Willebrand Disease Phenotype

Machha, Venkata R., Tischer, Alexander, Moon-Tasson, Laurie, Auton, Matthew

Journal:

Journal of Molecular Biology

Year:

2016

Language:

english

File:

PDF, 1.94 MB

english, 2016

35

Enhanced Local Disorder in a Clinically Elusive von Willebrand Factor Provokes High-Affinity Platelet Clumping

Tischer, Alexander, Machha, Venkata R., Frontroth, Juan P., Brehm, Maria A., Obser, Tobias, Schneppenheim, Reinhard, Mayne, Leland, Walter Englander, S., Auton, Matthew

Journal:

Journal of Molecular Biology

Year:

2017

Language:

english

File:

PDF, 1.55 MB

english, 2017

36

Estimating the human mutation rate from autozygous segments reveals population differences in human mutational processes

Narasimhan, Vagheesh M., Rahbari, Raheleh, Scally, Aylwyn, Wuster, Arthur, Mason, Dan, Xue, Yali, Wright, John, Trembath, Richard C., Maher, Eamonn R., Heel, David A. van, Auton, Adam, Hurles, Matthew

Journal:

Nature Communications

Year:

2017

Language:

english

File:

PDF, 652 KB

english, 2017

37

The Chaperonin GroEL: A Versatile Tool for Applied Biotechnology Platforms

O'Neil, Pierce T., Machen, Alexandra J., Deatherage, Benjamin C., Trecazzi, Caleb, Tischer, Alexander, Machha, Venkata R., Auton, Matthew T., Baldwin, Michael R., White, Tommi A., Fisher, Mark T.

Journal:

Frontiers in Molecular Biosciences

Year:

2018

Language:

english

File:

PDF, 7.96 MB

english, 2018

38

The von Willebrand factor Tyr2561 allele is a gain-of-function variant and a risk factor for early myocardial infarction

Schneppenheim, Reinhard, Hellermann, Natalie, Brehm, Maria A., Klemm, Ulrike, Obser, Tobias, Huck, Volker, Schneider, Stefan W., Denis, Cécile V., Tischer, Alexander, Auton, Matthew, März, Winfried, X

Journal:

Year:

2018

Language:

english

File:

PDF, 4.56 MB

english, 2018

39

Arabinose Alters Both Local and Distal H–D Exchange Rates in the Escherichia coli AraC Transcriptional Regulator

Tischer, Alexander, Brown, Matthew J., Schleif, Robert F., Auton, Matthew

Journal:

Year:

2019

Language:

english

File:

PDF, 3.33 MB

english, 2019

40

Glycosylation sterically inhibits platelet adhesion to von Willebrand factor without altering intrinsic conformational dynamics

Tischer, Alexander, Machha, Venkata R., Moon‐Tasson, Laurie, Benson, Linda M., Auton, Matthew

Journal:

Journal of Thrombosis and Haemostasis

Year:

2019

Language:

english

File:

PDF, 1.79 MB

english, 2019

41

Edge sharpness as a function of depth in plain film radiography

Auton, Timothy, Bishop, Romilly, Haliczenko, Kylie, Hurley, Matthew, Madden, Shane, Rose, Bethany, Hart, Robin

Journal:

Year:

2005

File:

PDF, 154 KB

2005

42

Glycosylation sterically inhibits platelet adhesion to von Willebrand factor without altering intrinsic conformational dynamics

Tischer, Alexander, Machha, Venkata R., Moon‐Tasson, Laurie, Benson, Linda M., Auton, Matthew

Journal:

Journal of Thrombosis and Haemostasis

Year:

2019

File:

PDF, 1.79 MB

2019

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